Microbiological profile of bacteria causing ventilator-associated pneumonia in the intensive care unit of a high-complexity hospital

Luis Ángel Rodríguez-Chávez Maribel Luz Esteban-Dionicio Cristhian Renzho Elsayed Rodriguez-Mendoza About the authors

Mr. Editor. Ventilator-associated pneumonia (VAP), a healthcare-associated infection, is defined as a pulmonary infection that occurs in a patient who has been on mechanical ventilation for more than 48 hours 11. Hospital Nacional Cayetano Heredia. Plan de vigilancia, prevención y control de las infecciones asociadas al cuidado de la salud. Octubre 2021. [Internet]. Lima: HNCH; 2021 [citado 1 de noviembre de 2022]. Disponible en: https://www.hospitalcayetano.gob.pe/PortalWeb/wpcontent/uploads/resoluciones/2021/RD/RD_393-2021-HCH-DG.pdf.
https://www.hospitalcayetano.gob.pe/Port...
. In order to stablish diagnosis, the Peruvian Social Security (EsSalud) defines VAP as a pulmonary complication after 48 to 72 h of endotracheal intubation in patients undergoing mechanical ventilation; in addition to new or progressive infiltrates, consolidation, cavitation or pleural effusion on chest X-ray, and at least one of the following signs: purulent sputum or change in sputum characteristics, fever, increased or decreased leukocyte count, presence of cultured microorganisms in blood, or identification of a microorganism in bronchoalveolar lavage or biopsy 22. Aristondo F, Moyano A, Álvarez P. Guía de práctica clínica para el manejo de la neumonía intrahospitalaria y asociada a ventilador mecánico - Seguro social de salud, EsSalud. 2019. [Internet] [citado 1 de noviembre de 2022]. Disponible en: http://www.essalud.gob.pe/ietsi/pdfs/guias/GPC_NAV_NIH_Version_Corta.pdf.
http://www.essalud.gob.pe/ietsi/pdfs/gui...
,33. Papazian L, Klompas M, Luyt CE. Ventilator-associated pneumonia in adults: a narrative review. Intensive Care Med. 2020;46(5):888-906. doi: 10.1007/s00134-020-05980-0.
https://doi.org/10.1007/s00134-020-05980...
. In 2012, the incidence density of VAP, according to data from the Peruvian Ministry of Health (MINSA), was 10.6 cases per 1000 days of mechanical ventilator use; the lowest incidence density was reported in 2018 with 7.56 cases per 1000 days of mechanical ventilator use. However, by 2021 the cumulative incidence rose, even above historical values, to 11.66 cases per 1000 days of mechanical ventilator use 44. Ministerio de Salud. Situación epidemiológica de las infecciones Asociadas a la Atención en Salud (IAAS) 2021 [Internet] [citado 1 de octubre de 2022]. Disponible en: http://www.dge.gob.pe/portal/docs/tools/teleconferencia/2021/SE182021/03.pdf.
http://www.dge.gob.pe/portal/docs/tools/...
, this probably was a consequence of the COVID-19 pandemic.

Therefore, a descriptive study was conducted with the aim of identifying the cumulative incidence of VAP, as well as the most common microorganisms and their antimicrobial sensitivity profile, in the intensive care unit (ICU) of the high complexity hospital “Virgen de La Puerta” of La Libertad, Peru, during January to December 2022. The population consisted of all positive bronchial secretion cultures from patients diagnosed with VAP. Samples were processed with the VITEK system (bioMérieux Laboratory, Argentina), which is an automated system for bacterial identification and antimicrobial sensitivity study. Bacterial identification is based on the inoculation of a suspension of microorganisms on cards with certain biochemical reaction panels 55. Jordá Vargas L, Vila A, Lanza A, Bonvehi P, Nazar J, Mikietuk A, et al. Utilidad del sistema VITEK en la identificación bacteriana y estudios de sensibilidad antimicrobiana. Acta Bioquím Clin Latinoam. 2005;39(1):19-25..

A total of 339 results were obtained from 7546 days of mechanical ventilator use (total sum of the number of days of mechanical ventilator use of each of the studied patients), which represents a cumulative incidence of 44.92 cases per 1000 days of mechanical ventilator use (much higher than the national value reported by MINSA). The most frequently isolated bacteria were Acinetobacter baumannii with 117 cases (35.5%), Pseudomonas aeruginosa with 76 cases (22.4%), Klebsiella pneumoniae with 49 cases (14.5%) and Staphylococcus aureus with 46 cases (13.6%). The remaining 15.0% were distributed among the other germs (Table 1).

Table 1
Absolute and percentage distribution of germs that caused mechanical ventilator-associated pneumonias in the intensive care unit of the high complexity hospital "Virgen de La Puerta" of La Libertad.

Antimicrobial sensitivity differed according to the type of isolated bacteria. Acinetobacter baumannii showed very low sensitivity to carbapenems (10.2% for meropenem and 13.0% for imipenem), quinolones (10.4% for ciprofloxacin and 13.5% for levofloxacin) and cephalosporins (0.0% for ceftriaxone, 13.1% for cefepime and 14.0% for ceftazidime), on the other hand it showed sensitivity rates above 80.0% to colistin and tigecycline (85.9% for tigecycline and 100.0% for colistin). Likewise, Pseudomonas aeruginosa showed very low sensitivity to carbapenems (30.6% for meropenem and 34.7% for imipenem), quinolones (50.0% for ciprofloxacin and 50.0% for levofloxacin), cephalosporins (0.0% for ceftriaxone, 48.1% for cefepime and 54.5% for ceftazidime), aminoglycosides (68.9% for amikacin, 52.8% for gentamicin) and piperacillin/tazobactam (44.9%), while having high sensitivity to colistin (100.0%). Klebsiella pneumoniae showed better sensitivity to carbapenems (96.7% for meropenem and 98.0% for imipenem), quinolones (72.9% for ciprofloxacin and 81.2% for levofloxacin), cephalosporins (93.9% for cefepime and 90.6% for ceftazidime), aminoglycosides (98.0% for amikacin and 88.0% for gentamicin) and piperacillin/tazobactam (96.9%). Staphylococcus aureus showed a 100.0% sensitivity rate to daptomycin, rifampicin, teicoplasmin and tigecycline; unfortunately, no data was available for oxacillin and vancomycin.

According to our results, it is very likely that the COVID-19 pandemic changed the frequency rates of germs causing VAP. For example, Acinetobacter baumannii ranked first, with 117 cases (34.5%); this is consistent with what was reported by the Cayetano Heredia National Hospital (HNCH) 11. Hospital Nacional Cayetano Heredia. Plan de vigilancia, prevención y control de las infecciones asociadas al cuidado de la salud. Octubre 2021. [Internet]. Lima: HNCH; 2021 [citado 1 de noviembre de 2022]. Disponible en: https://www.hospitalcayetano.gob.pe/PortalWeb/wpcontent/uploads/resoluciones/2021/RD/RD_393-2021-HCH-DG.pdf.
https://www.hospitalcayetano.gob.pe/Port...
during 2020, they reported that this germ was the main cause of VAP, although with higher frequency (53.0%).

Pseudomonas aeruginosa showed low sensitivity to cephalosporins, quinolones, amikacin and carbapenems. These data show a non-favorable sensitivity profile and are similar to those reported by the HNCH, who reported 40.0% to 50.0% sensitivity rates to carbapenems 11. Hospital Nacional Cayetano Heredia. Plan de vigilancia, prevención y control de las infecciones asociadas al cuidado de la salud. Octubre 2021. [Internet]. Lima: HNCH; 2021 [citado 1 de noviembre de 2022]. Disponible en: https://www.hospitalcayetano.gob.pe/PortalWeb/wpcontent/uploads/resoluciones/2021/RD/RD_393-2021-HCH-DG.pdf.
https://www.hospitalcayetano.gob.pe/Port...
.

The present study describes the VAPs that occurred during the COVID-19 pandemic and coincides with a similar study in European ICUs after the second and third waves 66. Cornistein W, Colque ÁM, Staneloni MI, Monserrat Lloria M, Lares M, González AL, et al. Neumonía asociada a ventilación mecánica. Actualización y recomendaciones inter-sociedades, Sociedad Argentina de Infectología - Sociedad Argentina de Terapia Intensiva. Medicina (B Aires). 2018;78(2):99-106.,77. Russo A, Olivadese V, Trecarichi EM, Torti C. Bacterial Ventilator-Associated Pneumonia in COVID-19 Patients: Data from the Second and Third Waves of the Pandemic. J Clin Med. 2022;11(9):2279. doi: 10.3390/jcm11092279.
https://doi.org/10.3390/jcm11092279...
) that reported that the most frequently isolated germs were Pseudomonas aeruginosa, Escherichia coli, Klebsiella pneumoniae and Acinetobacter spp. and gram-positive cocci, such as Staphylococcus aureus.

One of the limitations of this study was that culture samples were taken from bronchial secretion at the time of aspiration and not from bronchoalveolar lavage. Another limitation was that antibiogram results for Staphylococcus aureus did not include data for oxacillin and vancomycin, due to lack of supplies.

Finally, it is very possible that one of the causes of the increase in VAP with associated bacterial resistance was the indiscriminate use of antimicrobials during the COVID-19 pandemic 88. Moyano LM, Leon-Jimenez F, Cavalcanti S, Ocaña V. Uso responsable de los antibióticos en COVID-19 en Perú: ad portas de otra pandemia!. Aten Primaria. 2022; 54(2): 102172. doi: 10.1016/j.aprim.2021.102172.
https://doi.org/10.1016/j.aprim.2021.102...
. In this sense, the Centers for Disease Control and Prevention (CDC) reported an increase in infections by resistant germs, particularly carbapenem-resistant Acinetobacter, which increased by 78%; infections by multidrug-resistant Pseudomonas aeruginosa increased by 32%, infections by vancomycin-resistant Enterococcus increased by 14% and methicillin-resistant Staphylococcus aureus infections increased by 13% 99. CDC Español. El COVID-19 hace retroceder el progreso en la lucha contra la resistencia a los antimicrobianos en los EE. UU. [Internet]. Centers for Disease Control and Prevention. 2022 [citado 10 de marzo de 2023]. Disponible en: https://www.cdc.gov/spanish/mediosdecomunicacion/comunicados/d_resistencia-antimicrobianos_071222.html.
https://www.cdc.gov/spanish/mediosdecomu...
. Because of this, it was stated that the COVID-19 pandemic “set the U.S. back in its fight against bacterial resistance” 99. CDC Español. El COVID-19 hace retroceder el progreso en la lucha contra la resistencia a los antimicrobianos en los EE. UU. [Internet]. Centers for Disease Control and Prevention. 2022 [citado 10 de marzo de 2023]. Disponible en: https://www.cdc.gov/spanish/mediosdecomunicacion/comunicados/d_resistencia-antimicrobianos_071222.html.
https://www.cdc.gov/spanish/mediosdecomu...
. Also, the use of gloves by healthcare personnel (which affected the frequency of hand washing) may have played a role in the increase in resistant infections. Fortunately, this practice was disregarded in its entirety in 2022, so we expect the results of future studies to differ.

In conclusion, the cumulative incidence of VAP in the ICU of the “Virgen de La Puerta” hospital was 44.92 cases per 1000 days of mechanical ventilator use, and there was a change in the bacteriological and resistance profile of these infections due to the COVID-19 pandemic with a predominance of infection by germs with high antibacterial resistance.

References

  • 1
    Hospital Nacional Cayetano Heredia. Plan de vigilancia, prevención y control de las infecciones asociadas al cuidado de la salud. Octubre 2021. [Internet]. Lima: HNCH; 2021 [citado 1 de noviembre de 2022]. Disponible en: https://www.hospitalcayetano.gob.pe/PortalWeb/wpcontent/uploads/resoluciones/2021/RD/RD_393-2021-HCH-DG.pdf
    » https://www.hospitalcayetano.gob.pe/PortalWeb/wpcontent/uploads/resoluciones/2021/RD/RD_393-2021-HCH-DG.pdf
  • 2
    Aristondo F, Moyano A, Álvarez P. Guía de práctica clínica para el manejo de la neumonía intrahospitalaria y asociada a ventilador mecánico - Seguro social de salud, EsSalud. 2019. [Internet] [citado 1 de noviembre de 2022]. Disponible en: http://www.essalud.gob.pe/ietsi/pdfs/guias/GPC_NAV_NIH_Version_Corta.pdf
    » http://www.essalud.gob.pe/ietsi/pdfs/guias/GPC_NAV_NIH_Version_Corta.pdf
  • 3
    Papazian L, Klompas M, Luyt CE. Ventilator-associated pneumonia in adults: a narrative review. Intensive Care Med. 2020;46(5):888-906. doi: 10.1007/s00134-020-05980-0.
    » https://doi.org/10.1007/s00134-020-05980-0
  • 4
    Ministerio de Salud. Situación epidemiológica de las infecciones Asociadas a la Atención en Salud (IAAS) 2021 [Internet] [citado 1 de octubre de 2022]. Disponible en: http://www.dge.gob.pe/portal/docs/tools/teleconferencia/2021/SE182021/03.pdf
    » http://www.dge.gob.pe/portal/docs/tools/teleconferencia/2021/SE182021/03.pdf
  • 5
    Jordá Vargas L, Vila A, Lanza A, Bonvehi P, Nazar J, Mikietuk A, et al. Utilidad del sistema VITEK en la identificación bacteriana y estudios de sensibilidad antimicrobiana. Acta Bioquím Clin Latinoam. 2005;39(1):19-25.
  • 6
    Cornistein W, Colque ÁM, Staneloni MI, Monserrat Lloria M, Lares M, González AL, et al. Neumonía asociada a ventilación mecánica. Actualización y recomendaciones inter-sociedades, Sociedad Argentina de Infectología - Sociedad Argentina de Terapia Intensiva. Medicina (B Aires). 2018;78(2):99-106.
  • 7
    Russo A, Olivadese V, Trecarichi EM, Torti C. Bacterial Ventilator-Associated Pneumonia in COVID-19 Patients: Data from the Second and Third Waves of the Pandemic. J Clin Med. 2022;11(9):2279. doi: 10.3390/jcm11092279.
    » https://doi.org/10.3390/jcm11092279
  • 8
    Moyano LM, Leon-Jimenez F, Cavalcanti S, Ocaña V. Uso responsable de los antibióticos en COVID-19 en Perú: ad portas de otra pandemia!. Aten Primaria. 2022; 54(2): 102172. doi: 10.1016/j.aprim.2021.102172.
    » https://doi.org/10.1016/j.aprim.2021.102172
  • 9
    CDC Español. El COVID-19 hace retroceder el progreso en la lucha contra la resistencia a los antimicrobianos en los EE. UU. [Internet]. Centers for Disease Control and Prevention. 2022 [citado 10 de marzo de 2023]. Disponible en: https://www.cdc.gov/spanish/mediosdecomunicacion/comunicados/d_resistencia-antimicrobianos_071222.html
    » https://www.cdc.gov/spanish/mediosdecomunicacion/comunicados/d_resistencia-antimicrobianos_071222.html

  • Ethical aspects.

    The authors declare that the identity of the patients was preserved. Likewise, only the results of antibiograms from the ICU were used, and the study was approved by the hospital management for its execution and publication.

  • Funding.

    Self-funded

  • Cite as:

    Rodríguez-Chávez LA, Esteban-Dionicio ML, Rodriguez-Mendoza CRE. Microbiological profile of bacteria causing ventilator-associated pneumonia in the intensive care unit of a high-complexity hospital. Rev Peru Med Exp Salud Publica. 2023;40(1):115-7. doi: 10.17843/rpmesp.2023.401.12377.

Publication Dates

  • Publication in this collection
    23 June 2023
  • Date of issue
    Jan-Mar 2023

History

  • Received
    23 Nov 2022
  • Accepted
    15 Mar 2023
  • Published
    24 Mar 2023
Instituto Nacional de Salud Lima - Lima - Peru
E-mail: revmedex@ins.gob.pe